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How atoms are displayed in OpenGL

Atoms colors and radii are defined in the files ATOM_COLORS.DEF and ATOM_RADIUS.DEF respectively. A site defined as:

site S1 occ Al+3 1 beq 1

will be displayed as a Sulfur atom. If the Site Name, minus the numbers, is not found in ATOM_COLOURS.DEF then the atom type defined at the first site occupancy is used. Thus a site defined as:

site _S1 occ Al+3 1 beq 1

will be displayed as an Aluminium atom.


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